An edition of Transcriptional regulation
(2012)
Transcriptional regulation
methods and protocols
by Ales Vancura
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Transcriptional Regulation: Methods and Protocols
2016, Humana Press
in English
1493958542 9781493958542
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Transcriptional regulation: methods and protocols
2012, Humana Press
in English
1617793752 9781617793752
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Book Details
Table of Contents
Genome-wide in vivo cross-linking of sequence-specific transcription factors / Xiao-Yong li and Mark D. Biggin
Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast : "in silico" And "wet-lab" approaches / Nuno P. Mira, Miguel C. Teixeira, and Isabel Sá-Correia
Electrophoretic mobility shift assay analysis of NF[kappa]B transcriptional regulation by nuclear I[kappa]B[alpha] / Ashish Juvekar ... [et al.]
Probing endogenous RNA polymerase II pre-initiation complexes by electrophoretic mobility shift assay / Emmanuelle Wilhelm, Christopher Takacs, and Brendan Bell
Elucidating protein : DNA complex by oligonucleotide DNA affinity purification / Teddy T.C. Yang and Chi-Wing Chow
Chromatin immunoprecipitation assay as a tool for analyzing transcription factor activity / Padmaja Gade and Dhan V. Kalvakolanu
Two-step cross-linking for analysis of protein-chromatin interactions / Bing Tian, Jun Yan, and Allan R. Brasier
Chromatin immunoprecipitation analysis of NF[kappa]B transcriptional regulation by nuclear I[kappa]B[alpha] in human macrophages / Sitharam Ramaswami ... [et al.]
In vivo ChIP for the analysis of microdissected tissue samples / Chris Murgatroyd, Anke Hoffmann, and Dietmar Spengler
Quantification of protein-DNA interactions by in vivo chromatin immunoprecipitation in yeast / Amparo Pascual-Ahuir and Markus Proft
Mapping protein-DNA interactions using ChIP-sequencing / Charles E. Massie and Ian G. Mils
ChIP and re-ChIP assays : investigating interactions between regulatory proteins, histone modifications, and the DNA sequences to which they bind / Agnieszka D. Truax and Susanna F. Greer
Transcriptional regulation of genes via hypoxia-inducible factor / Olga Roche and Michael Ohh
Exchange protein directly activated by cyclic AMP-1-regulated recruitment of CCAAT/enhancer-binding proteins to the suppressor of cytokine signaling-3 promoter / William A. Sands ... [et al.]
Computational analysis of promoter elements and chromatin features in yeast / John J. Wyrick
Chromatin affinity purification / Ryoko Harada and Alain Nepveu
Determination of histone acetylation status by chromatin immunoprecipitation / Luciano Galdieri, John Moon, and Ales Vancura
Immunostaining of Drosophila polytene chromosomes to investigate recruitment of chromatin-binding proteins / Magdalena Murawska and Alexander Brehm
Detection of transcriptional activators, co-activators, and chromatin remodeling by chromatin immunoprecipitation coupled with real-time PCR / Tamara Y. Erkina and Alexandre M. Erkine
Chromatin endogenous cleavage and psoralen crosslinking assays to analyze rRNA gene chromatin in vivo / Joachim Griesenbeck ... [et al.]
UV-induced DNA damage and DNA repair in ribosomal genes chromatin / Julie Pelloux ... [et al.]
Analysis of SUC2 promoter structure by nucleosome scanning / Jennifer Chang and Ales Vancura
Chromatin immunoprecipitation of mouse embryos / Anne K. Voss ... [et al.]
Chromatin immunoprecipitation in mouse hippocampal cells and tissues / Badi Sri Sailaja, Takumi Takizawa, and Eran Meshorer
Approaches for studying nucleosome movement by ATP-dependent chromatin remodeling complexes / Swetansu K. Hota and Blaine Bartholomew
Mapping protein-DNA and protein-protein interactions of ATP-dependent chromatin remodelers / Swetansu K. Hota ... [et al.]
Evaluation of histone-modifying enzymes in stem cell populations / Leanne Stalker and Christopher Wynder
Purification of multiprotein histone acetyltransferase complexes / Yuan-Liang Wang, Francesco Faiola, and Ernest Martinez
Reconstitution of active and stoichiometric multisubunit lysine acetyltransferase complexes in insect cells / Kezhi Yan ... [et al.]
Affinity purification of MLL3/MLL4 histone H3K4 methyltransferase complex / Young-Wook Cho, SunHwa Hong, and Kai Ge
Methods for analyzing histone citrullination in chromatin structure and gene regulation / Pingxin Li, Jing Hu, and Yanming Wang
Analysis of mRNA abundance and stability by ribonuclease protection assay / Cristina Romero-López ... [et al.]
Array-based nuclear run-on analysis / Jinshui Fan ... [et al.]
In vivo run-on assays to monitor nascent precursor RNA transcripts / Piergiorgio Percipalle and Emilie Louvet
Genome wide full-length transcript analysis using 5' and 3' paired-end-tag next generation sequencing (RNA-PET) / Xiaoan Ruan and Yijun Ruan
Analysis of co-transcriptional RNA processing by RNA- ChIP assay / Danielle Bittencourt and Didier Auboeuf
Quantitative analysis of transcription elongation by RNA polymerase I in vitro / David Alan Schneider
Detection and characterization of transcription termination / Ghada Ghazal, Jules Gagnon, and Sherif Abou Elela
Promoter-associated noncoding RNA from the CCND1 promoter / Xiaoyuan Song ... [et al.]
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Includes bibliographical references and index.
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