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1
Multiple sequence alignment methods
2014, Humana Press, Springer
in English
1627036458 9781627036450
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Table of Contents
Dynamic programming -- O. Ufuk Nalbantoglu
Heuristic alignment methods -- Osamu Gotoh
Objective functions -- Haluk Dogan and Hasan H. Otu
Who watches the watchmen? An appraisal of benchmarks for multiple sequence alignment -- Stefano Iantorno ... [et al.]
BLAST and FASTA similarity searching for multiple sequence alignment -- William R. Pearson
Clustal omega, accurate alignment of very large numbers of sequences -- Fabian Sievers and Desmond G. Higgins
T-coffee : tree-based consistency objective function for alignment evaluation -- Cedrik Magi ... [et al.]
MAFFT : iterative refinement and additional methods -- Kazutaka Katoh and Daron M. Standley
Multiple sequence alignment using probcons and probalign -- Usman Roshan
Phylogeny-aware alignment with PRANK -- Ari Loytynoja
GramAlign : fast alignment driven by grammar-based phylogeny -- David J. Russell
Multiple sequence alignment with DIALIGN -- Burkhard Morgenstern
PicXAA : a probabilistic scheme for finding the maximum expected accuracy alignment of multiple biological sequences -- Sayed Mohammad Ebrahim Sahraeian and Byung-Jun Yoon
Multiple protein sequence alignment with MSAProbs -- Yongchao Liu and Bertil Schmidt
Large-scale multiple sequence alignment and tree estimation using SATe -- Kevin Liu and Tandy Warnow
PRALINE : a versatile multiple sequence alignment toolkit -- Punto Bawono and Jaap Heringa
PROMALS3D : multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information -- Jimin Pei and Nick V. Grishin
MSACompro : improving multiple protein sequence alignment by predicted structural features -- Xin Deng and Jianlin Cheng.
Edition Notes
Includes bibliographical references and index.
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Feedback?February 26, 2022 | Edited by ImportBot | import existing book |
November 12, 2020 | Created by MARC Bot | import new book |